Publications 2024

List
JSON
CSV
XLSX
TXT
Title Authors Journal Published Online
Life Science 2.0: reframing the life science sector for 'the benefit on mankind'. Vallin M, Tomson G, Kampmann B, ..., Wanyenze RK, Ottersen OP Glob Health Action 17 (1) 2330758 2024-12-31 2024-04-05
Incontinentia pigmenti underlies thymic dysplasia, autoantibodies to type I IFNs, and viral diseases. Rosain J, Le Voyer T, Liu X, ..., Anderson MS, Casanova JL J. Exp. Med. 221 (11) - 2024-11-04 2024-10-01
Local climate, air quality and leaf litter cover shape foliar fungal communities on an urban tree. Faticov M, Amorim JH, Abdelfattah A, ..., Laforest-Lapointe I, Tack AJM Ambio 53 (11) 1673-1685 2024-11-00 2024-06-13
The lncRNA SNHG26 drives the inflammatory-to-proliferative state transition of keratinocyte progenitor cells during wound healing. Li D, Liu Z, Zhang L, ..., Sommar P, Xu Landén N Nat Commun 15 (1) 8637 2024-10-05 2024-10-05
The single-cell transcriptomic atlas iPain identifies senescence of nociceptors as a therapeutical target for chronic pain treatment. Techameena P, Feng X, Zhang K, Hadjab S Nat Commun 15 (1) 8585 2024-10-04 2024-10-04
Multi-omics analysis reveals the key factors involved in the severity of the Alzheimer's disease. Meng L, Jin H, Yulug B, ..., Uhlén M, Mardinoglu A Alzheimers Res Ther 16 (1) 213 2024-10-02 2024-10-02
IL-7-dependent and -independent lineages of IL-7R-dependent human T cells. Arango-Franco CA, Ogishi M, Unger S, ..., Casanova JL, Puel A J. Clin. Invest. 134 (19) - 2024-10-01 2024-10-01
Ebullition dominates methane emissions in stratified coastal waters. Hermans M, Stranne C, Broman E, ..., Jilbert T, Humborg C Sci. Total Environ. 945 (-) 174183 2024-10-01 2024-06-21
Sex estimation using long bones in the largest burial site of the Copper Age: Linear discriminant analysis and random forest Díaz-Navarro S, Díez-Hermano S, Rojo-Guerra MA, ..., Gunther T, Uriarte MH Journal of Archaeological Science: Reports 58 (-) 104730 2024-10-00 2024-10-00
High rate of gene family evolution in proximity to the origin of ectomycorrhizal symbiosis in Inocybaceae. Khan FK, Sánchez-García M, Johannesson H, Ryberg M New Phytol. 244 (1) 219-234 2024-10-00 2024-08-07
Merging multi-omics with proteome integral solubility alteration unveils antibiotic mode of action. Maity R, Zhang X, Liberati FR, ..., Aínsa JA, Sancho J Elife 13 (-) - 2024-09-27 2024-09-27
CDK4 is co-amplified with either TP53 promoter gene fusions or MDM2 through distinct mechanisms in osteosarcoma. Saba KH, Difilippo V, Styring E, ..., Baumhoer D, Nord KH npj Genom. Med. 9 (1) 42 2024-09-25 2024-09-25
Chemical Exposomics in Human Plasma by Lipid Removal and Large-Volume Injection Gas Chromatography–High-Resolution Mass Spectrometry Xie H, Sdougkou K, Bonnefille B, ..., Rantakokko P, Martin JW Environ. Sci. Technol. - (-) - 2024-09-24 2024-09-24
Determining Marine Biodegradation Kinetics of Chemicals Discharged from Offshore Oil Platforms─Whole Mixture Testing at High Dilutions Increases Environmental Relevance. Møller MT, Birch H, Sjøholm KK, ..., Papazian S, Mayer P Environ. Sci. Technol. - (-) - 2024-09-18 2024-09-18
Longitudinal Exposomics in a Multiomic Wellness Cohort Reveals Distinctive and Dynamic Environmental Chemical Mixtures in Blood. Sdougkou K, Papazian S, Bonnefille B, ..., Martin LJ, Martin JW Environ. Sci. Technol. 58 (37) 16302-16315 2024-09-17 2024-09-05
Chromosome-level genome assembly of the morabine grasshopper Vandiemenella viatica19. Li X, Jayaprasad S, Einarsdottir E, ..., Kawakami T, Palacios-Gimenez OM Sci Data 11 (1) 997 2024-09-12 2024-09-12
Enrichment of Cis-Acting Regulatory Elements in Differentially Methylated Regions Following Lipopolysaccharide Treatment of Bovine Endometrial Epithelial Cells. Jhamat N, Guo Y, Han J, ..., Andersson G, Niazi A Int J Mol Sci 25 (18) - 2024-09-11 2024-09-11
Inherited human RelB deficiency impairs innate and adaptive immunity to infection. Le Voyer T, Maglorius Renkilaraj MRL, Moriya K, ..., Tangye SG, Puel A Proc. Natl. Acad. Sci. U.S.A. 121 (37) e2321794121 2024-09-10 2024-09-04
Epigenetic regulation of cell state by H2AFY governs immunogenicity in high-risk neuroblastoma. Nagarajan D, Parracho RT, Corujo D, ..., Buschbeck M, Mao Y J. Clin. Invest. - (-) - 2024-09-10 2024-09-10
Structure of the iminium reaction intermediate in an engineered aldolase explains the carboligation activity toward arylated ketones and aldehydes. Hebert H, Sönmez E, Purhonen P, Widersten M Structure 32 (9) 1322-1326.e4 2024-09-05 2024-07-15
Immune system adaptation during gender-affirming testosterone treatment Tadepally L, Consiglio C, Sardh F, ..., Landegren N, Brodin P Nature 633 (-) 155-164 2024-09-04 -
Temporal dynamics of faster neo-Z evolution in butterflies. Höök L, Vila R, Wiklund C, Backström N Evolution 78 (9) 1554-1567 2024-09-03 2024-05-30
ADAR3 modulates neuronal differentiation and regulates mRNA stability and translation. Karlström V, Sagredo EA, Planells J, ..., Visa N, Öhman M Nucleic Acids Res. - (-) - 2024-09-01 2024-09-01
Speciation in savanna birds in South America: The case of the Least Nighthawk Chordeiles pusillus (Aves: Caprimulgidae) in and out of the Amazon. Fernandes AM, Cohn-Haft M, Fábio Silveira L, ..., Nascimento N, Olsson U Mol. Phylogenet. Evol. 198 (-) 108117 2024-09-00 2024-06-07
New finds of European bison identified through the systematic DNA-based species identification of archaeological remains of large bovines from Scandinavia Rosengren E, Rossi C, Heino MT, Sinding MHS Journal of Archaeological Science: Reports 57 (-) 104668 2024-09-00 2024-09-00
Immune system adaptation during gender-affirming testosterone treatment. Lakshmikanth T, Consiglio C, Sardh F, ..., Landegren N, Brodin P Nature 633 (8028) 155-164 2024-09-00 2024-09-04
Contemporary intergeneric hybridization and backcrossing among birds-of-paradise. Thörn F, Soares AER, Müller IA, ..., Blom MPK, Irestedt M Evolution Letters 8 (5) 680-694 2024-09-00 2024-06-08
Rapid and robust isolation of microglia and vascular cells from brain subregions for integrative single-cell analyses. Preka E, Lastra Romero A, Sun Y, ..., Osman AM, Blomgren K Heliyon 10 (16) e35838 2024-08-30 2024-08-05
Plastome evolution in Santalales involves relaxed selection prior to loss of ndh genes and major boundary shifts of the inverted repeat. Edlund M, Anderson BM, Su HJ, ..., Nickrent DL, Petersen G Ann. Bot. - (-) - 2024-08-30 2024-08-30
Five centuries of consanguinity, isolation, health, and conflict in Las Gobas: A Northern Medieval Iberian necropolis. Rodríguez-Varela R, Yaka R, Pochon Z, ..., Azkarate A, Götherström A Sci Adv 10 (35) eadp8625 2024-08-30 2024-08-28
DNA methylation governs the sensitivity of repeats to restriction by the HUSH-MORC2 corepressor. Pandiloski N, Horváth V, Karlsson O, ..., Jakobsson J, Douse CH Nat Commun 15 (1) 7534 2024-08-30 2024-08-30
Identification of novel and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries Akaberi D, Pourghasemi Lati M, Krambrich J, ..., Verho O, Lennerstrand J Antimicrob Agents Chemother - (-) - 2024-08-28 2024-08-28
Depth-specific distribution of bacterial MAGs in permafrost active layer in Ny Ålesund, Svalbard (79°N). Sipes K, Buongiorno J, Steen AD, ..., Vishnivetskaya TA, Lloyd KG Syst. Appl. Microbiol. 47 (6) 126544 2024-08-28 2024-08-28
Massively parallel analysis of single-molecule dynamics on next-generation sequencing chips. Aguirre Rivera J, Mao G, Sabantsev A, ..., Jinek M, Deindl S Science 385 (6711) 892-898 2024-08-23 2024-08-22
Surface-Shaving of Staphylococcus aureus Strains and Quantitative Proteomic Analysis Reveal Differences in Protein Abundance of the Surfaceome. Karlsson A, Alarcón LA, Piñeiro-Iglesias B, ..., Jin T, Karlsson R Microorganisms 12 (8) - 2024-08-21 2024-08-21
Gel-Assisted Proteome Position Integral Shift Assay Returns Molecular Weight to Shotgun Proteomics and Identifies Caspase 3 Substrates. Meng Z, Saei AA, Gharibi H, ..., Gaetani M, Zubarev RA Anal. Chem. 96 (33) 13533-13541 2024-08-20 2024-08-07
Androgen receptor pathway inhibitors and taxanes in metastatic prostate cancer: an outcome-adaptive randomized platform trial. De Laere B, Crippa A, Discacciati A, ..., Grönberg H, Lindberg J Nat. Med. - (-) - 2024-08-20 2024-08-20
Examining the liver-pancreas crosstalk reveals a role for the molybdenum cofactor in β-cell regeneration Karampelias C, Băloiu B, Rathkolb B, ..., Hrabě de Angelis M, Andersson O Life Science Alliance 7 (11) e202402771 2024-08-19 -
Origin, structure, and composition of the spider major ampullate silk fiber revealed by genomics, proteomics, and single-cell and spatial transcriptomics. Sonavane S, Hassan S, Chatterjee U, ..., Reimegård J, Rising A Sci Adv 10 (33) eadn0597 2024-08-16 2024-08-14
Motor innervation directs the correct development of the mouse sympathetic nervous system. Erickson AG, Motta A, Kastriti ME, ..., Bonanomi D, Adameyko I Nat Commun 15 (1) 7065 2024-08-16 2024-08-16
Visualization and analysis of medically relevant tandem repeats in nanopore sequencing of control cohorts with pathSTR. De Coster W, Hoijer I, Bruggeman I, ..., Ameur A, Rademakers R Genome Res. - (-) - 2024-08-15 2024-08-15
READv2: advanced and user-friendly detection of biological relatedness in archaeogenomics. Alaçamlı E, Naidoo T, Güler MN, ..., Malmström H, Günther T Genome Biol. 25 (1) 216 2024-08-12 2024-08-12
Multifaceted Proteome Analysis at Solubility, Redox, and Expression Dimensions for Target Identification. Saei AA, Lundin A, Lyu H, ..., Gygi SP, Zubarev RA Adv Sci (Weinh) - (-) e2401502 2024-08-09 2024-08-09
AlphaFold accelerated discovery of psychotropic agonists targeting the trace amine-associated receptor 1. Díaz-Holguín A, Saarinen M, Vo DD, ..., Carlsson J, Svenningsson P Sci Adv 10 (32) eadn1524 2024-08-09 2024-08-07
JAK inhibition decreases the autoimmune burden in Down syndrome Rachubinski AL, Wallace E, Gurnee E, ..., Norris DA, Espinosa JM - - (-) - 2024-08-08 2024-08-08
Few chemoreceptor genes in the ambrosia beetle Trypodendron lineatum may reflect its specialized ecology. Biswas T, Vogel H, Biedermann PHW, ..., Yuvaraj JK, Andersson MN BMC Genomics 25 (1) 764 2024-08-06 2024-08-06
AssemblyQC: a Nextflow pipeline for reproducible reporting of assembly quality. Rashid U, Wu C, Shiller J, ..., Thomson S, Deng CH Bioinformatics 40 (8) - 2024-08-02 2024-07-30
LRPPRC and SLIRP synergize to maintain sufficient and orderly mammalian mitochondrial translation. Rubalcava-Gracia D, Bubb K, Levander F, ..., Koolmeister C, Larsson N Nucleic Acids Res. - (-) - 2024-08-01 2024-08-01
Ecological genomics in the Northern krill uncovers loci for local adaptation across ocean basins. Unneberg P, Larsson M, Olsson A, ..., Meyer B, Wallberg A Nat Commun 15 (1) 6297 2024-08-01 2024-08-01
Fungal communities associated with Picea abiesPinus sylvestris and Larix sp. seeds of different geographic origin: Implications for disease management Larsson R, Menkis A, Olson Å For. Path. 54 (4) - 2024-08-00 2024-08-05
Detection of transcriptome-wide microRNA-target interactions in single cells with agoTRIBE. Sekar V, Mármol-Sánchez E, Kalogeropoulos P, ..., Biryukova I, Friedländer MR Nat. Biotechnol. 42 (8) 1296-1302 2024-08-00 2023-09-21
A multiomic characterization of the leukemia cell line REH using short- and long-read sequencing. Lysenkova Wiklander M, Arvidsson G, Bunikis I, ..., Ameur A, Nordlund J Life Sci. Alliance 7 (8) - 2024-08-00 2024-05-22
A genetic-epigenetic interplay at 1q21.1 locus underlies CHD1L-mediated vulnerability to primary progressive multiple sclerosis. Pahlevan Kakhki M, Giordano A, Starvaggi Cucuzza C, ..., Kular L, Jagodic M Nat Commun 15 (1) 6419 2024-07-30 2024-07-30
Multi-compartmental diversification of neutralizing antibody lineages dissected in SARS-CoV-2 spike-immunized macaques. Mandolesi M, Das H, de Vries L, ..., Murrell B, Karlsson Hedestam GB Nat Commun 15 (1) 6338 2024-07-27 2024-07-27
Hybridization in birds-of-paradise: Widespread ancestral gene flow despite strong sexual selection in a lek-mating system. Blom MPK, Peona V, Prost S, ..., Suh A, Irestedt M iScience 27 (7) 110300 2024-07-19 2024-06-19
Insights into mechanisms of MALT1 allostery from NMR and AlphaFold dynamic analyses. Wallerstein J, Han X, Levkovets M, ..., Agback T, Orekhov V Commun Biol 7 (1) 868 2024-07-16 2024-07-16
Enhancing Molecular Characterization of Dissolved Organic Matter by Integrative Direct Infusion and Liquid Chromatography Nontargeted Workflows. Patrone J, Vila-Costa M, Dachs J, ..., Gago-Ferrero P, Gil-Solsona R Environ. Sci. Technol. 58 (28) 12454-12466 2024-07-16 2024-07-03
Temporal dynamics of woolly mammoth genome erosion prior to extinction. Dehasque M, Morales HE, Díez-Del-Molino D, ..., Vartanyan S, Dalén L Cell 187 (14) 3531-3540.e13 2024-07-11 2024-06-27
Seroepidemiological assessment of the spread of SARS-CoV-2 among 25 and 28 year-old adult women in Finland between March 2020-June 2022. Gray P, Eriksson T, Skoglund L, ..., Dillner J, Lehtinen M PLoS ONE 19 (7) e0305285 2024-07-11 2024-07-11
Inverted triplications formed by iterative template switches generate structural variant diversity at genomic disorder loci. Grochowski CM, Bengtsson JD, Du H, ..., Lupski JR, Carvalho CMB Cell Genomics 4 (7) 100590 2024-07-10 2024-06-21
Spinocerebellar ataxia type 4 is caused by a GGC expansion in the ZFHX3 gene and is associated with prominent dysautonomia and motor neuron signs. Paucar M, Nilsson D, Engvall M, ..., Wedell A, Svenningsson P J. Intern. Med. - (-) - 2024-07-07 2024-07-07
eLife assessment: Nucleotide binding to the ATP-cone in anaerobic ribonucleotide reductases allosterically regulates activity by modulating substrate binding Boal AK - - (-) - 2024-07-05 2024-07-05
Discovery of a novel inhibitor of macropinocytosis with antiviral activity. Porebski B, Christ W, Corman A, ..., Hühn D, Fernandez-Capetillo O Mol Ther - (-) - 2024-07-02 2024-07-02
CRISPR-Cas9 Knockout Screens Identify DNA Damage Response Pathways and BTK as Essential for Cisplatin Response in Diffuse Large B-Cell Lymphoma Issa II, Due H, Brøndum RF, ..., Schmierer B, Dybkær K Cancers (Basel) 16 (13) 2437 2024-07-02 2024-07-02
Carboxyl-group compounds activate voltage-gated potassium channels via a distinct mechanism. Rönnelid O, Elinder F J. Gen. Physiol. 156 (7) - 2024-07-01 2024-06-04
Cancer Core Europe: Leveraging Institutional Synergies to Advance Oncology Research and Care Globally. Carmona J, Chavarria E, Donoghue K, ..., Zwart W, Tabernero J Cancer Discov 14 (7) 1147-1153 2024-07-01 2024-06-13
Molecular basis for different substrate-binding sites and chaperone functions of the BRICHOS domain. Chen G, Wang Y, Zheng Z, ..., Knight SD, Johansson J Protein Sci. 33 (7) e5063 2024-07-00 2024-06-12
Distinct origin and region-dependent contribution of stromal fibroblasts to fibrosis following traumatic injury in mice. Holl D, Hau WF, Julien A, ..., Dias DO, Göritz C Nat. Neurosci. 27 (7) 1285-1298 2024-07-00 2024-06-07
Detection and quantification of Na,K-ATPase dimers in the plasma membrane of living cells by FRET-FCS. Nordahl L, Akkuratov EE, Heimgärtner J, ..., Wennmalm S, Brismar H Biochimica et Biophysica Acta (BBA) - General Subjects 1868 (7) 130619 2024-07-00 2024-04-20
Membrane topography and the overestimation of protein clustering in single molecule localisation microscopy – identification and correction Adler J, Bernhem K, Parmryd I Commun Biol 7 (1) - 2024-06-29 2024-06-29
Chromosome-level genome assembly and annotation of the social amoeba Dictyostelium firmibasis. Edelbroek B, Kjellin J, Jerlström-Hultqvist J, Koskiniemi S, Söderbom F Sci Data 11 (1) 678 2024-06-22 2024-06-22
Cryo-electron microscopy reveals hydrogen positions and water networks in photosystem II. Hussein R, Graça A, Forsman J, ..., Zouni A, Schröder WP Science 384 (6702) 1349-1355 2024-06-21 2024-06-20
Structures of the Staphylococcus aureus ribosome inhibited by fusidic acid and fusidic acid cyclopentane. González-López A, Larsson DSD, Koripella RK, ..., Sanyal S, Selmer M Sci Rep 14 (1) 14253 2024-06-20 2024-06-20
Completed genome and emergence scenario of the multidrug-resistant nosocomial pathogen Staphylococcus epidermidis ST215. Kellgren T, Dwibedi C, Widerström M, ..., Rydén P, Johansson A BMC Microbiol. 24 (1) 215 2024-06-19 2024-06-19
Comprehensive Genomic Profiling Alters Clinical Diagnoses in a Significant Fraction of Tumors Suspicious of Sarcoma. Öfverholm I, Wallander K, Haglund C, ..., Lin Y, Haglund de Flon F Clin. Cancer Res. 30 (12) 2647-2658 2024-06-14 2024-04-04
descSPIM: an affordable and easy-to-build light-sheet microscope optimized for tissue clearing techniques. Otomo K, Omura T, Nozawa Y, ..., Brismar H, Susaki EA Nat Commun 15 (1) 4941 2024-06-12 2024-06-12
Integrative transcriptomic and proteomic profiling of the effects of cell confluency on gene expression. Lobo V, Shcherbinina E, Westholm JO, ..., Anastasakis DG, Sarshad AA Sci Data 11 (1) 617 2024-06-12 2024-06-12
Spatially resolved multiomics on the neuronal effects induced by spaceflight in mice. Masarapu Y, Cekanaviciute E, Andrusivova Z, ..., Costes SV, Giacomello S Nat Commun 15 (1) 4778 2024-06-11 2024-06-11
Climate change induces shifts in coastal Baltic Sea surface water microorganism stress and photosynthesis gene expression. Seidel L, Broman E, Ståhle M, ..., Ketzer M, Dopson M Front Microbiol 15 (-) 1393538 2024-06-07 2024-06-07
ASXLs binding to the PHD2/3 fingers of MLL4 provides a mechanism for the recruitment of BAP1 to active enhancers. Zhang Y, Xie G, Lee JE, ..., Ge K, Kutateladze TG Nat Commun 15 (1) 4883 2024-06-07 2024-06-07
Structural diversity of Arc oligomers within the excitatory synapse Damenti M, Coceano G, Mendes Silva M, ..., Jungmann R, Testa I - - (-) - 2024-06-06 2024-06-06
Deconwolf enables high-performance deconvolution of widefield fluorescence microscopy images. Wernersson E, Gelali E, Girelli G, ..., Crosetto N, Bienko M Nat. Methods - (-) - 2024-06-06 2024-06-06
Detection of rare variants among nuclei populating the arbuscular mycorrhizal fungal model species Rhizophagus irregularis DAOM197198. Manyara D, Sánchez-García M, Montoliu-Nerin M, Rosling A G3 (Bethesda) 14 (6) - 2024-06-05 2024-04-24
Multimodal Mass Spectrometry Identifies a Conserved Protective Epitope in S. pyogenes Streptolysin O Tang D, Gueto-Tettay C, Hjortswang E, ..., Malmström L, Malmström J Anal. Chem. 96 (22) 9060-9068 2024-06-04 2024-05-03
Mini-heterochromatin domains constrain the cis-regulatory impact of SVA transposons in human brain development and disease. Horváth V, Garza R, Jönsson ME, ..., Douse CH, Jakobsson J Nat. Struct. Mol. Biol. - (-) - 2024-06-04 2024-06-04
Ancient Sheep Genomes Reveal Four Millennia of North European Short-Tailed Sheep in the Baltic Sea Region. Larsson MNA, Morell Miranda P, Pan L, ..., Storå J, Günther T Genome Biol Evol 16 (6) - 2024-06-04 2024-05-25
Phylogenomic analysis of Stylops reveals the evolutionary history of a Holarctic Strepsiptera radiation parasitizing wild bees. Lähteenaro M, Benda D, Straka J, Nylander JAA, Bergsten J Mol. Phylogenet. Evol. 195 (-) 108068 2024-06-00 2024-03-28
Macrophages upregulate mural cell-like markers and support healing of ischemic injury by adopting functions important for vascular support. Amoedo-Leite C, Parv K, Testini C, ..., Christoffersson G, Phillipson M Nat Cardiovasc Res 3 (6) 685-700 2024-06-00 2024-06-06
Childhood screening for type 1 diabetes comparing automated multiplex Antibody Detection by Agglutination-PCR (ADAP) with single plex islet autoantibody radiobinding assays. Lind A, Freyhult E, de Jesus Cortez F, ..., Lernmark Å, Better Diabetes Diagnosis (BDD) study group EBioMedicine 104 (-) 105144 2024-06-00 2024-05-08
Blood biomarkers of Alzheimer's disease in the community: Variation by chronic diseases and inflammatory status. Valletta M, Vetrano DL, Rizzuto D, ..., Fratiglioni L, Grande G Alzheimers Dement 20 (6) 4115-4125 2024-06-00 2024-05-08
A combination of long and short read genomics reveals frequent p-arm breakpoints within chromosome 21 complex genomic rearrangements Schuy J, Sæther KB, Lisfeld J, ..., Eisfeldt J, Lindstrand A Genetics in Medicine Open - (-) 101863 2024-06-00 2024-06-00
PIK3CA mutations in endocrine-resistant breast cancer. Schagerholm C, Robertson S, Toosi H, Sifakis EG, Hartman J Sci Rep 14 (1) 12542 2024-05-31 2024-05-31
NGS method for parallel processing of high quality, damaged or fragmented input material using target enrichment. Lyander A, Gellerbring A, Hägglund M, Elhami K, Wirta V PLoS ONE 19 (5) e0304411 2024-05-29 2024-05-29
Species-specific dynamics may cause deviations from general biogeographical predictions - evidence from a population genomics study of a New Guinean endemic passerine bird family (Melampittidae). Müller IA, Thörn F, Rajan S, ..., Jønsson KA, Irestedt M PLoS ONE 19 (5) e0293715 2024-05-23 2024-05-23
Plastid phylogenomics and cytonuclear discordance in Rubioideae, Rubiaceae. Thureborn O, Wikström N, Razafimandimbison SG, Rydin C PLoS ONE 19 (5) e0302365 2024-05-20 2024-05-20
MDM2 amplification in rod-shaped chromosomes provides clues to early stages of circularized gene amplification in liposarcoma. Sydow S, Piccinelli P, Mitra S, ..., Spierings D, Mertens F Commun Biol 7 (1) 606 2024-05-20 2024-05-20
Retron-Eco1 assembles NAD+-hydrolyzing filaments that provide immunity against bacteriophages. Carabias A, Camara-Wilpert S, Mestre MR, ..., Pinilla-Redondo R, Montoya G Mol. Cell - (-) - 2024-05-18 2024-05-18
Complex genetic architecture of the chicken Growth1 QTL region. Ou JH, Rönneburg T, Carlborg Ö, ..., Siegel PB, Rubin CJ PLoS ONE 19 (5) e0295109 2024-05-13 2024-05-13
Copy number variation and elevated genetic diversity at immune trait loci in Atlantic and Pacific herring. Mohamadnejad Sangdehi F, Jamsandekar MS, Enbody ED, Pettersson ME, Andersson L BMC Genomics 25 (1) 459 2024-05-10 2024-05-10
Modulation of innate immune response to mRNA vaccination after SARS-CoV-2 infection or sequential vaccination in humans. Hellgren F, Rosdahl A, Arcoverde Cerveira R, ..., Cajander S, Loré K JCI Insight 9 (9) - 2024-05-08 2024-05-08
Colonial-driven extinction of the blue antelope despite genomic adaptation to low population size. Hempel E, Faith JT, Preick M, ..., Westbury MV, Hofreiter M Curr. Biol. 34 (9) 2020-2029.e6 2024-05-06 2024-04-12
Meiotic drive against chromosome fusions in butterfly hybrids. Boman J, Wiklund C, Vila R, Backström N Chromosome Res. 32 (2) 7 2024-05-04 2024-05-04
Genetic Causes and Genomic Consequences of Breakdown of Distyly in Linum trigynum. Gutiérrez-Valencia J, Zervakis PI, Postel Z, ..., Arroyo J, Slotte T Mol. Biol. Evol. 41 (5) - 2024-05-03 2024-05-06
Maintenance of caecal homeostasis by diverse adaptive immune cells in the rhesus macaque. Castro Dopico X, Guryleva M, Mandolesi M, ..., Murrell B, Karlsson Hedestam GB Clin Transl Immunology 13 (5) e1508 2024-05-02 2024-05-02
Growth and mortality rates of picophytoplankton in the Baltic Sea Proper Alegria Zufia J, Laber C, Legrand C, Lindehoff E, Farnelid H Mar. Ecol. Prog. Ser. 735 (-) 63-76 2024-05-02 2024-05-02
Sex-biased gene expression during neural differentiation of human embryonic stem cells Pottmeier P, Nikolantonaki D, Lanner F, Peuckert C, Jazin E Front Cell Dev Biol 12 (-) - 2024-05-01 2024-05-01
Male-transmitted transgenerational effects of the herbicide linuron on DNA methylation profiles in Xenopus tropicalis brain and testis. Roza M, Eriksson ANM, Svanholm S, Berg C, Karlsson O Sci. Total Environ. 923 (-) 170949 2024-05-01 2024-02-15
Chromatin accessibility during human first-trimester neurodevelopment. Mannens CCA, Hu L, Lönnerberg P, ..., Posthuma D, Linnarsson S Nature - (-) - 2024-05-01 2024-05-01
Ruxolitinib: A new hope for ventilator-induced diaphragm dysfunction. Addinsall AB, Cacciani N, Moruzzi N, ..., Kirkland JL, Larsson L Acta Physiol (Oxf) 240 (5) e14128 2024-05-00 2024-03-29
Head-to-head comparison of relevant cell sources of small extracellular vesicles for cardiac repair: Superiority of embryonic stem cells. González-King H, Rodrigues PG, Albery T, ..., Wang QD, Jennbacken K J Extracell Vesicles 13 (5) e12445 2024-05-00 2024-05-07
Ectomycorrhizal fungi are more sensitive to high soil nitrogen levels in forests exposed to nitrogen deposition. Jörgensen K, Clemmensen KE, Wallander H, Lindahl BD New Phytol. 242 (4) 1725-1738 2024-05-00 2024-01-11
Population genomic history of the endangered Anatolian and Cyprian mouflons in relation to worldwide wild, feral and domestic sheep lineages. Atağ G, Kaptan D, Yüncü E, ..., Hadjisterkotis E, Somel M Genome Biol Evol - (-) - 2024-04-27 2024-04-27
Loss of NEDD8 in cancer cells causes vulnerability to immune checkpoint blockade in triple-negative breast cancer. Papakyriacou I, Kutkaite G, Rúbies Bedós M, ..., Menden MP, Mao Y Nat Commun 15 (1) 3581 2024-04-27 2024-04-27
Phenotypic characterization and candidate gene analysis of a short kernel and brassinosteroid insensitive mutant from hexaploid oat (Avena sativa). Tsardakas Renhuldt N, Bentzer J, Ahrén D, Marmon S, Sirijovski N Front Plant Sci 15 (-) 1358490 2024-04-26 2024-04-26
N-glycoproteomic analyses of human intestinal enteroids, varying in histo-blood group geno- and phenotypes, reveal a wide repertoire of fucosylated glycoproteins. Nilsson J, Rimkute I, Sihlbom C, ..., Estes MK, Larson G Glycobiology 34 (6) - 2024-04-24 2024-04-09
High clonal diversity and spatial genetic admixture in early prostate cancer and surrounding normal tissue. Zhang N, Harbers L, Simonetti M, ..., Bienko M, Crosetto N Nat Commun 15 (1) 3475 2024-04-24 2024-04-24
A chemical inhibitor of IST1-CHMP1B interaction impairs endosomal recycling and induces noncanonical LC3 lipidation. Knyazeva A, Li S, Corkery DP, ..., Waldmann H, Wu Y Proc. Natl. Acad. Sci. U.S.A. 121 (17) e2317680121 2024-04-23 2024-04-18
HIV-2 mediated effects on target and bystander cells induce plasma proteome remodeling. Johansson E, Nazziwa J, Freyhult E, ..., Jansson M, SWEGUB CORE group iScience 27 (4) 109344 2024-04-19 2024-02-28
Radiolabeled 15-mer peptide internalization is mediated by megalin (LRP2 receptor) in a CRISPR/Cas9-based LRP2 knockout human kidney cell model. Durinova A, Smutna L, Barta P, ..., Pavek P, Trejtnar F EJNMMI Radiopharm Chem 9 (1) 32 2024-04-18 2024-04-18
Long-read sequencing and optical mapping generates near T2T assemblies that resolves a centromeric translocation. Ten Berk de Boer E, Ameur A, Bunikis I, ..., Eisfeldt J, Lindstrand A Sci Rep 14 (1) 9000 2024-04-18 2024-04-18
Effects of bottom trawling and environmental factors on benthic bacteria, meiofauna and macrofauna communities and benthic ecosystem processes. Bradshaw C, Iburg S, Morys C, ..., Jonsson P, Nascimento FJA Sci. Total Environ. 921 (-) 171076 2024-04-15 2024-02-19
Growth-regulated co-occupancy of Mediator and Lsm3 at intronic ribosomal protein genes. Abdel-Fattah WR, Carlsson M, Hu G, ..., Ronne H, Björklund S Nucleic Acids Res. - (-) - 2024-04-13 2024-04-13
Dual molecule targeting HDAC6 leads to intratumoral CD4+ cytotoxic lymphocytes recruitment through MHC-II upregulation on lung cancer cells. Ducellier S, Demeules M, Letribot B, ..., Nascimento M, Apcher S J Immunother Cancer 12 (4) - 2024-04-11 2024-04-11
Cellular architecture of evolving neuroinflammatory lesions and multiple sclerosis pathology. Kukanja P, Langseth CM, Rubio Rodríguez-Kirby LA, ..., Nilsson M, Castelo-Branco G Cell 187 (8) 1990-2009.e19 2024-04-11 2024-03-20
A time course analysis through diapause reveals dynamic temporal patterns of microRNAs associated with endocrine regulation in the butterfly Pieris napi. Roberts KT, Steward RA, Süess P, Lehmann P, Wheat CW Mol. Ecol. - (-) e17348 2024-04-10 2024-04-10
Exploring the short linear motif-mediated protein-protein interactions of CrkL through ProP-PD. Pagano L, Simonetti L, Pennacchietti V, ..., Ivarsson Y, Gianni S Biochem. Biophys. Res. Commun. 703 (-) 149658 2024-04-09 2024-02-07
Deletion of the TMEM30A gene enables leukemic cell evasion of NK cell cytotoxicity. Kristenson L, Badami C, Ljungberg A, ..., Tang KW, Thorén FB Proc. Natl. Acad. Sci. U.S.A. 121 (15) e2316447121 2024-04-09 2024-04-01
Antibiotic class with potent in vivo activity targeting lipopolysaccharide synthesis in Gram-negative bacteria. Huseby DL, Cao S, Zamaratski E, ..., Hughes D, Karlén A Proc. Natl. Acad. Sci. U.S.A. 121 (15) e2317274121 2024-04-09 2024-04-05
A phenotypic screening approach to target p60AmotL2-expressing invasive cancer cells. Fonseca P, Cui W, Struyf N, ..., Östling P, Holmgren L J. Exp. Clin. Cancer Res. 43 (1) 107 2024-04-09 2024-04-09
Transcriptomic atlas of midbrain dopamine neurons uncovers differential vulnerability in a Parkinsonism lesion model. Yaghmaeian Salmani B, Lahti L, Gillberg L, ..., Svenningsson P, Perlmann T Elife 12 (-) - 2024-04-08 2024-04-08
Functional redundancy revealed by the deletion of the mimivirus GMC-oxidoreductase genes. Alempic JM, Bisio H, Villalta A, ..., Couté Y, Abergel C Microlife 5 (-) uqae006 2024-04-05 2024-04-05
Adaptive introgression reveals the genetic basis of a sexually selected syndrome in wall lizards. Feiner N, Yang W, Bunikis I, While GM, Uller T Sci Adv 10 (14) eadk9315 2024-04-05 2024-04-03
Treatment Monitoring of a Patient with Synchronous Metastatic Angiosarcoma and Breast Cancer Using ctDNA. Vannas C, Escobar M, Österlund T, ..., Fagman H, Ståhlberg A Int J Mol Sci 25 (7) - 2024-04-04 2024-04-04
The HLA region in ANCA-associated vasculitis: characterisation of genetic associations in a Scandinavian patient population. Lundtoft C, Knight A, Meadows JRS, ..., Lindblad-Toh K, Dahlqvist J RMD Open 10 (2) - 2024-04-04 2024-04-04
Proteome profiling of home-sampled dried blood spots reveals proteins of SARS-CoV-2 infections. Fredolini C, Dodig-Crnković T, Bendes A, ..., Roxhed N, Schwenk JM Commun Med (Lond) 4 (1) 55 2024-04-02 2024-04-02
Fast volumetric multifocus structured illumination microscopy of subcellular dynamics in living cells Senftleben ML, Bajor A, Hirata E, Abrahamsson S, Brismar H Biomed. Opt. Express 15 (4) 2281 2024-04-01 2024-03-11
Microbial succession and denitrifying woodchip bioreactor performance at low water temperatures. Hellman M, Juhanson J, Wallnäs F, Herbert RB, Hallin S J Environ Manage 356 (-) 120607 2024-04-00 2024-03-26
High-throughput measurement of the content and properties of nano-sized bioparticles with single-particle profiler. Sych T, Schlegel J, Barriga HMG, ..., Stevens MM, Sezgin E Nat. Biotechnol. 42 (4) 587-590 2024-04-00 2023-06-12
Habitat is more important than climate for structuring soil fungal communities associated in truffle sites. Piñuela Y, Alday JG, Oliach D, ..., Peter M, Bonet JA Fungal Biol 128 (2) 1724-1734 2024-04-00 2024-02-24
Estrogen receptor activation remodels TEAD1 gene expression to alleviate hepatic steatosis. Sommerauer C, Gallardo-Dodd CJ, Savva C, ..., Williams C, Kutter C Mol. Syst. Biol. 20 (4) 374-402 2024-04-00 2024-03-08
Diagnostic yield and clinical impact of germline sequencing in children with CNS and extracranial solid tumors-a nationwide, prospective Swedish study. Tesi B, Robinson KL, Abel F, ..., Taylan F, Nordgren A Lancet Reg Health Eur 39 (-) 100881 2024-04-00 2024-03-19
Cancer-associated fibroblasts rewire the estrogen receptor response in luminal breast cancer, enabling estrogen independence. Reid SE, Pantaleo J, Bolivar P, ..., Seashore-Ludlow B, Pietras K Oncogene 43 (15) 1113-1126 2024-04-00 2024-02-22
VISION — an open-source software for automated multi-dimensional image analysis of cellular biophysics Weber F, Iskrak S, Ragaller F, ..., Sezgin E, Andronico LA - - (-) - 2024-03-29 2024-03-29
Defining the contribution of Troy-positive progenitor cells to the mouse esophageal epithelium. Grommisch D, Wang M, Eenjes E, ..., Giselsson P, Genander M Dev. Cell - (-) - 2024-03-28 2024-03-28
MLL4 binds TET3. Becht DC, Mohid SA, Lee JE, ..., Zhang Y, Kutateladze TG Structure - (-) - 2024-03-27 2024-03-27
Effects of microgravity on neural crest stem cells. Han Y, Barasa P, Zeger L, ..., Fredriksson R, Kozlova EN Front. Neurosci. 18 (-) 1379076 2024-03-27 2024-03-27
Comparison and optimization of protocols and whole-genome capture conditions for ancient DNA samples. Yaka R, Lagerholm VK, Linderholm A, ..., Somel M, Götherström A BioTechniques - (-) - 2024-03-26 2024-03-26
Abstract 2025: Zeb1 downregulation sensitizes pancreatic cancer-associated fibroblasts to killing by oncolytic reovirus through upregulation of the reovirus receptor junction adhesion molecule A Dam N, Harryvan TJ, Schmierer B, Hawinkels LJAC, Kemp V Cancer Res. 84 (6_Supplement) 2025-2025 2024-03-22 2024-03-22
Epigenetic modulators link mitochondrial redox homeostasis to cardiac function in a sex-dependent manner ElBeck Z, Hossain MB, Siga H, ..., Végvári Á, Betsholtz C Nat Commun 15 (1) - 2024-03-20 2024-03-20
Dominance between self-incompatibility alleles determines the mating system of Capsella allopolyploids Duan T, Zhang Z, Genete M, ..., Castric V, Vekemans X Evolution Letters - (-) - 2024-03-17 2024-03-17
Influence of divalent cations on the extraction of organic acids in coffee determined by GC-MS and NMR. Bratthäll T, Figueira J, Nording ML Heliyon 10 (5) e26625 2024-03-15 2024-02-17
Biochemical analysis of the endoribonuclease activity of the human mitochondrial topoisomerase 1 Bader CPJ, Kasho E, Forslund JME, Wessels M, Wanrooij PH - - (-) - 2024-03-15 2024-03-15
A distinctive tumor compartment in pancreatic lobules defined by nascent stroma and classical tumor cell phenotype Söderqvist S, Viljamaa A, Geyer N, ..., Moro CF, Gerling M - - (-) - 2024-03-15 2024-03-15
The super-pangenome of Populus unveils genomic facets for its adaptation and diversification in widespread forest trees. Shi T, Zhang X, Hou Y, ..., Yin T, Wang J Mol Plant - (-) - 2024-03-13 2024-03-13
Neutralizing IFN-γ autoantibodies are rare and pathogenic in HLA-DRB1*15:02 or 16:02 individuals. Peel JN, Yang R, Le Voyer T, ..., Ku CL, Casanova JL J. Clin. Invest. 134 (8) - 2024-03-12 2024-03-12
Cardiac biopsies reveal differences in transcriptomics between left and right ventricle in patients with or without diagnostic signs of heart failure. Frisk C, Das S, Eriksson MJ, ..., Linde C, Persson B Sci Rep 14 (1) 5811 2024-03-09 2024-03-09
Identification of microbial pathogens in Neolithic Scandinavian humans. Bergfeldt N, Kırdök E, Oskolkov N, ..., Storå J, Götherström A Sci Rep 14 (1) 5630 2024-03-07 2024-03-07
The serological immunogenicity of the third and fourth doses of COVID-19 vaccine in patients with inflammatory rheumatic diseases on different biologic or targeted DMARDs: a Swedish nationwide study (COVID-19-REUMA). Frodlund M, Nived P, Chatzidionysiou K, ..., Klareskog L, Kapetanovic M Microbiol Spectr - (-) e0298123 2024-03-05 2024-03-05
Loss of chromosome Y in regulatory T cells. Mattisson J, Halvardson J, Davies H, ..., Dumanski JP, Forsberg LA BMC Genomics 25 (1) 243 2024-03-05 2024-03-05
Genomic ancestry and social dynamics of the last hunter-gatherers of Atlantic France. Simões LG, Peyroteo-Stjerna R, Marchand G, ..., Günther T, Jakobsson M Proc. Natl. Acad. Sci. U.S.A. 121 (10) e2310545121 2024-03-05 2024-02-26
fhl2b mediates extraocular muscle protection in zebrafish models of muscular dystrophies and its ectopic expression ameliorates affected body muscles. Dennhag N, Kahsay A, Nissen I, ..., von Hofsten J, Pedrosa Domellöf F Nat Commun 15 (1) 1950 2024-03-02 2024-03-02
High-Quality Genome Assemblies of 4 Members of the Podospora anserina Species Complex. Ament-Velásquez SL, Vogan AA, Wallerman O, ..., Giraud T, Johannesson H Genome Biol Evol 16 (3) - 2024-03-02 2024-02-22
The impact of circulating protein levels identified by affinity proteomics on short-term, overall breast cancer risk. Grassmann F, Mälarstig A, Dahl L, ..., Schwenk JM, Czene K Br. J. Cancer 130 (4) 620-627 2024-03-00 2023-12-22
Sorption of pharmaceuticals to foam and aerobic granular sludge with different morphologies Burzio C, Mohammadi AS, Smith S, ..., Persson F, Wilén BM Resources, Environment and Sustainability 15 (-) 100149 2024-03-00 2024-03-00
Rare coding variants in NOX4 link high ROS levels to psoriatic arthritis mutilans. Wang S, Nikamo P, Laasonen L, ..., Ståhle M, Tapia-Paez I EMBO Mol Med 16 (3) 596-615 2024-03-00 2024-02-20
Kupffer cells dictate hepatic responses to the atherogenic dyslipidemic insult. Di Nunzio G, Hellberg S, Zhang Y, ..., Olofsson PS, Malin SG Nat Cardiovasc Res 3 (3) 356-371 2024-03-00 2024-03-11
Human PRH1, PRH2 susceptibility and resistance and Streptococcus mutans virulence phenotypes specify different microbial profiles in caries. Sheng N, Mårell L, Sitaram RT, ..., Westerlund A, Strömberg N EBioMedicine 101 (-) 105001 2024-03-00 2024-02-15
Genetic constraints in genes exhibiting splicing plasticity in facultative diapause. Steward RA, Pruisscher P, Roberts KT, Wheat CW Heredity (Edinb) 132 (3) 142-155 2024-03-00 2024-01-30
Enhancer mutations modulate the severity of chemotherapy-induced myelosuppression. Zhigulev A, Norberg Z, Cordier J, ..., Gréen H, Sahlén P Life Sci. Alliance 7 (3) - 2024-03-00 2024-01-16
Comparison of high-throughput single-cell RNA-seq methods for ex vivo drug screening. Gezelius H, Enblad AP, Lundmark A, ..., Andersson C, Nordlund J NAR Genom Bioinform 6 (1) lqae001 2024-03-00 2024-01-29
Whole genome case-control study of central nervous system toxicity due to antimicrobial drugs. Ås J, Bertulyte I, Norgren N, ..., Wadelius M, Hallberg P PLoS ONE 19 (2) e0299075 2024-02-29 2024-02-29
Population genomic analyses reveal that salinity and geographic isolation drive diversification in a free-living protist. Rengefors K, Annenkova N, Wallenius J, ..., Kremp A, Ahrén D Sci Rep 14 (1) 4986 2024-02-29 2024-02-29
New insights into complex formation by SARS-CoV-2 nsp10 and nsp14. Sele C, Krupinska E, Andersson Rasmussen A, ..., Fisher SZ, Knecht W Nucleosides Nucleotides Nucleic Acids - (-) 1-15 2024-02-29 2024-02-29
Transcriptomic analysis identifies candidate genes for Aphanomyces root rot disease resistance in pea. Kälin C, Piombo E, Bourras S, ..., Elfstrand M, Karlsson M BMC Plant Biol. 24 (1) 144 2024-02-28 2024-02-28
Quantifying Fluorescence Lifetime Responsiveness of Environment-Sensitive Probes for Membrane Fluidity Measurements Ragaller et al J. Phys. Chem. B - (-) - 2024-02-28 2024-02-28
scCircle-seq unveils the diversity and complexity of extrachromosomal circular DNAs in single cells. Chen JP, Diekmann C, Wu H, ..., Bienko M, Crosetto N Nat Commun 15 (1) 1768 2024-02-27 2024-02-27
Tumor Predisposing Post-Zygotic Chromosomal Alterations in Bladder Cancer-Insights from Histologically Normal Urothelium. Stańkowska W, Sarkisyan D, Bruhn-Olszewska B, ..., Filipowicz N, Dumanski JP Cancers (Basel) 16 (5) - 2024-02-27 2024-02-27
Gene flow and an anomaly zone complicate phylogenomic inference in a rapidly radiated avian family (Prunellidae). Jiang Z, Zang W, Ericson PGP, ..., Lei F, Qu Y BMC Biol. 22 (1) 49 2024-02-27 2024-02-27
Epigenome-wide analysis of frailty: Results from two European twin cohorts. Mak JKL, Skovgaard AC, Nygaard M, ..., Soerensen M, Jylhävä J Aging Cell - (-) e14135 2024-02-27 2024-02-27
Intestinal stroma guides monocyte differentiation to macrophages through GM-CSF. Kvedaraite E, Lourda M, Mouratidou N, ..., Henter JI, Svensson M Nat Commun 15 (1) 1752 2024-02-26 2024-02-26
Dynamics of Gut Bacteria Across Different Zooplankton Genera in the Baltic Sea. Xu T, Novotny A, Zamora-Terol S, Hambäck PA, Winder M Microb. Ecol. 87 (1) 48 2024-02-26 2024-02-26
No link between type I interferon autoantibody positivity and adverse reactions to COVID-19 vaccines. Yalcinkaya A, Cavalli M, Cederholm A, ..., Wadelius M, Landegren N NPJ Vaccines 9 (1) 42 2024-02-22 2024-02-22
The effect of nitrogen source and levels on hybrid aspen tree physiology and wood formation. Renström A, Choudhary S, Gandla ML, ..., Jämtgård S, Tuominen H Physiol Plantarum 176 (1) e14219 2024-02-21 2024-02-21
Inhibition of Insulin-Regulated Aminopeptidase by Imidazo [1,5-α]pyridines-Synthesis and Evaluation. Engen K, Lundbäck T, Yadav A, ..., Hallberg M, Larhed M Int J Mol Sci 25 (5) - 2024-02-21 2024-02-21
Clonally heritable gene expression imparts a layer of diversity within cell types. Mold JE, Weissman MH, Ratz M, ..., Michaëlsson J, Frisén J Cell Syst 15 (2) 149-165.e10 2024-02-21 2024-02-09
Ancient reindeer mitogenomes reveal island-hopping colonisation of the Arctic archipelagos. Hold K, Lord E, Brealey JC, ..., Martin MD, Dussex N Sci Rep 14 (1) 4143 2024-02-20 2024-02-20
Lymphocytic colitis can be transcriptionally divided into channelopathic and inflammatory lymphocytic colitis. Bhardwaj A, Münch A, Montague J, ..., Rosenstiel P, Escudero-Hernández C United European Gastroenterol J - (-) - 2024-02-17 2024-02-17
Long noncoding RNA plasmacytoma variant translocation 1 is overexpressed in cutaneous squamous cell carcinoma and exon 2 is critical for its oncogenicity. Li C, Sun C, Mahapatra KD, ..., Sonkoly E, Pivarcsi A Br J Dermatol 190 (3) 415-426 2024-02-16 2023-11-06
Identification and evaluation of small-molecule inhibitors against the dNTPase SAMHD1 via a comprehensive screening funnel. Zhang SM, Paulin CBJ, Shu H, ..., Helleday T, Rudd SG iScience 27 (2) 108907 2024-02-16 2024-01-13
Gene co-expression network analysis reveal core responsive genes in Parascaris univalens tissues following ivermectin exposure. Dube F, Delhomme N, Martin F, ..., Svärd S, Tydén E PLoS ONE 19 (2) e0298039 2024-02-15 2024-02-15
Genetic and environmental contributions to gaze lateralization across social and non-social stimuli in human infants. Viktorsson C, Portugal AM, Falck-Ytter T Sci Rep 14 (1) 3668 2024-02-14 2024-02-14
Disability and emotional symptoms in women with lipedema: A comparison with overweight/obese women. Chachaj A, Jeziorek M, Dudka I, ..., Kujawa K, Szuba A Adv Clin Exp Med - (-) - 2024-02-13 2024-02-13
A macrophage-collagen fragment axis mediates subcutaneous adipose tissue remodeling in mice. Vujičić M, Broderick I, Salmantabar P, ..., Sihlbom Wallem C, Wernstedt Asterholm I Proc. Natl. Acad. Sci. U.S.A. 121 (6) e2313185121 2024-02-06 2024-02-01
Phylogeography and phenotypic wing shape variation in a damselfly across populations in Europe. Yildirim Y, Kristensson D, Outomuro D, ..., Sniegula S, Johansson F BMC Ecol Evol 24 (1) 19 2024-02-03 2024-02-03
Asymmetric nucleosome PARylation at DNA breaks mediates directional nucleosome sliding by ALC1. Bacic L, Gaullier G, Mohapatra J, ..., Sabantsev A, Deindl S Nat Commun 15 (1) 1000 2024-02-02 2024-02-02
Xist ribonucleoproteins promote female sex-biased autoimmunity. Dou DR, Zhao Y, Belk JA, ..., Utz PJ, Chang HY Cell 187 (3) 733-749.e16 2024-02-01 2024-02-03
Structural and functional insight into the interaction of Clostridioides difficile toxin B and FZD7. Kinsolving J, Bous J, Kozielewicz P, ..., Dong M, Schulte G Cell Rep 43 (2) 113727 2024-02-01 2024-02-01
A Chromosome-Level Genome Assembly and Annotation for the Clouded Apollo Butterfly (Parnassius mnemosyne): A Species of Global Conservation Concern. Höglund J, Dias G, Olsen RA, ..., Talla V, Backström N Genome Biol Evol 16 (2) - 2024-02-01 2024-02-18
Recent increase in species-wide diversity after interspecies introgression in the highly endangered Iberian lynx. Lucena-Perez M, Paijmans JLA, Nocete F, ..., Barlow A, Godoy JA Nat Ecol Evol 8 (2) 282-292 2024-02-00 2024-01-15
Intrinsic deletion at 10q23.31, including the PTEN gene locus, is aggravated upon CRISPR-Cas9-mediated genome engineering in HAP1 cells mimicking cancer profiles. Geng K, Merino LG, Veiga RG, ..., Brinkman EK, Kutter C Life Sci. Alliance 7 (2) - 2024-02-00 2023-11-20
Genetic diversity patterns in farmed rainbow trout (Oncorhynchus mykiss) populations using genome-wide SNP and haplotype data. Longo A, Kurta K, Vanhala T, ..., de Koning DJ, Palaiokostas C Anim Genet 55 (1) 87-98 2024-02-00 2023-11-23
Fine-scale genetic structure in the orchid Gymnadenia conopsea is not associated with local density of flowering plants. Sletvold N, Joffard N, Söderquist L Am. J. Bot. 111 (2) e16273 2024-02-00 2024-01-30
Complex In Vitro Model Characterization for Context of Use in Toxicologic Pathology: Use Cases by Collaborative Teams of Biologists, Bioengineers, and Pathologists. Stokar-Regenscheit N, Bell L, Berridge B, ..., Sura R, Tomlinson L Toxicol Pathol 52 (2-3) 123-137 2024-02-00 2024-06-18
CPAP may promote an endothelial inflammatory milieu in sleep apnoea after coronary revascularization Peker Y, Celik Y, Behboudi A, ..., Gottlieb DJ, Jelic S EBioMedicine - (-) 105015 2024-02-00 2024-02-00
A cholesterol switch controls phospholipid scrambling by G protein-coupled receptors. Menon I, Sych T, Son Y, ..., Levitz J, Menon AK J. Biol. Chem. 300 (2) 105649 2024-02-00 2024-01-16
Batrachochytrium dendrobatidis strain affects transcriptomic response in liver but not skin in latitudinal populations of the common toad (Bufo bufo). Chondrelli N, Kuehn E, Meurling S, ..., Laurila A, Höglund J Sci Rep 14 (1) 2495 2024-01-30 2024-01-30
A two-step activation mechanism enables mast cells to differentiate their response between extracellular and invasive enterobacterial infection. von Beek C, Fahlgren A, Geiser P, ..., Pejler G, Sellin ME Nat Commun 15 (1) 904 2024-01-30 2024-01-30
Single-cell RNA-seq mapping of chicken peripheral blood leukocytes. Maxwell M, Söderlund R, Härtle S, Wattrang E BMC Genomics 25 (1) 124 2024-01-29 2024-01-29
Spatial Transcriptomics in a Case of Follicular Thyroid Carcinoma Reveals Clone-Specific Dysregulation of Genes Regulating Extracellular Matrix in the Invading Front. Condello V, Paulsson JO, Zedenius J, Näsman A, Juhlin CC Endocr. Pathol. - (-) - 2024-01-27 2024-01-27
High-parametric protein maps reveal the spatial organization in early-developing human lung Sariyar S, Sountoulidis A, Hansen JN, ..., Lundberg E, Ayoglu B - - (-) - 2024-01-25 2024-01-25
Whole-genome sequencing in prenatally detected congenital malformations: prospective cohort study in clinical setting. Westenius E, Conner P, Pettersson M, ..., Lindstrand A, Iwarsson E Ultrasound Obstet Gynecol - (-) - 2024-01-24 2024-01-24
Meta-analysis of ACE inhibitor-induced angioedema identifies novel risk locus. Mathey CM, Maj C, Eriksson N, ..., Nöthen MM, Forstner AJ J. Allergy Clin. Immunol. - (-) - 2024-01-22 2024-01-22
Genetic diversity and recent ancestry based on whole-genome sequencing of endangered Swedish cattle breeds. Harish A, Lopes Pinto FA, Eriksson S, Johansson AM BMC Genomics 25 (1) 89 2024-01-22 2024-01-22
Three immunizations with Novavax's protein vaccines increase antibody breadth and provide durable protection from SARS-CoV-2. Lenart K, Arcoverde Cerveira R, Hellgren F, ..., Smith G, Loré K NPJ Vaccines 9 (1) 17 2024-01-20 2024-01-20
Towards high-throughput parallel imaging and single-cell transcriptomics of microbial eukaryotic plankton. Grujčić V, Saarenpää S, Sundh J, ..., Foster RA, Andersson AF PLoS ONE 19 (1) e0296672 2024-01-19 2024-01-19
Remodeling of the human skeletal muscle proteome found after long-term endurance training but not after strength training. Emanuelsson EB, Arif M, Reitzner SM, ..., Sundberg CJ, Chapman MA iScience 27 (1) 108638 2024-01-19 2023-12-05
Metagenomic analysis of Mesolithic chewed pitch reveals poor oral health among stone age individuals. Kırdök E, Kashuba N, Damlien H, ..., Aravena A, Götherström A Sci Rep 13 (1) 22125 2024-01-18 2024-01-18
Ciliate Grazing on the Bloom-Forming Microalga Gonyostomum semen. Bergman I, Lindström ES, Sassenhagen I Microb. Ecol. 87 (1) 33 2024-01-18 2024-01-18
Targeting the Main Protease (Mpro, nsp5) by Growth of Fragment Scaffolds Exploiting Structure-Based Methodologies. Altincekic N, Jores N, Löhr F, ..., Sreeramulu S, Schwalbe H ACS Chem. Biol. - (-) - 2024-01-17 2024-01-17
High-throughput analysis of membrane fluidity unveils a hidden dimension in immune cell states Andronico LA, Jiang Y, Carannante V, ..., Brodin P, Sezgin E - - (-) - 2024-01-16 2024-01-16
Erythroid Differentiation Enhances RNA Mis-Splicing in SF3B1-Mutant Myelodysplastic Syndromes with Ring Sideroblasts. Moura PL, Mortera-Blanco T, Hofman IJ, ..., Jacobsen SEW, Hellström-Lindberg E Cancer Res. 84 (2) 211-225 2024-01-16 2023-11-03
Ultralight Ultrafast Enzymes. Zhang X, Meng Z, Beusch CM, ..., Gaetani M, Zubarev RA Angew. Chem. Int. Ed. Engl. 63 (3) e202316488 2024-01-15 2023-12-07
Apoptosis-mediated ADAM10 activation removes a mucin barrier promoting T cell efferocytosis. Drexhage LZ, Zhang S, Dupont M, ..., Karaji N, Sattentau QJ Nat Commun 15 (1) 541 2024-01-15 2024-01-15
A survey of ficolin-3 activity in Systemic Lupus Erythematosus reveals a link to hematological disease manifestations and autoantibody profile. Lindelöf L, Rantapää-Dahlqvist S, Lundtoft C, ..., Svenungsson E, Eriksson O J. Autoimmun. 143 (-) 103166 2024-01-13 2024-01-13
Profiling of Surface Protein Epitopes on Viral Particles by Multiplex Dual-Reporter Strategy Sahi M, Andersson S, Mattson C, ..., Chiodi F, Fredolini C J Vis Exp - (203) - 2024-01-12 2024-01-12
Furan Distribution as a Severity Indicator upon Organosolv Fractionation of Hardwood Sawdust through a Novel Ternary Solvent System Thoresen PP, Delgado Vellosillo I, Lange H, ..., Christakopoulos P, Matsakas L ACS Sustainable Chem. Eng. - (-) - 2024-01-12 2024-01-12
Differential expression and alternative splicing analyses of multiple tissues reveal albinism-associated genes in the Wels catfish (Silurus glanis). Ozerov MY, Noreikiene K, Kahar S, ..., Gross R, Vasemägi A Comp Biochem Physiol B Biochem Mol Biol 271 (-) 110941 2024-01-11 2024-01-11
Colony phase variation switch modulates antimicrobial tolerance and biofilm formation in Acinetobacter baumannii. Mushtaq F, Nadeem A, Yabrag A, ..., Uhlin BE, Ahmad I Microbiol Spectr - (-) e0295623 2024-01-11 2024-01-11
Identification of circulating autoantibodies to non-modified proteins associated with ACPA status in early rheumatoid arthritis. Lourido L, Joshua V, Hansson M, ..., Klareskog L, Blanco FJ Rheumatology (Oxford) - (-) - 2024-01-09 2024-01-09
Single-cell genomics of a bloom-forming phytoplankton species reveals population genetic structure across continents. Gollnisch R, Ahrén D, Rengefors K ISME J 18 (1) - 2024-01-08 2024-03-15
Separating phases of allopolyploid evolution with resynthesized and natural Capsella bursa-pastoris. Duan T, Sicard A, Glémin S, Lascoux M Elife 12 (-) - 2024-01-08 2024-01-08
Climate acts as an environmental filter to plant pathogens. Caballol M, Redondo MÁ, Catalán N, ..., Stenlid J, Oliva J ISME J 18 (1) - 2024-01-08 2024-02-17
A pan-genomic approach reveals novel Sulfurimonas clade in the ferruginous meromictic Lake Pavin. Biderre-Petit C, Courtine D, Hennequin C, ..., Divne A, Hochart C Mol Ecol Resour - (-) e13923 2024-01-08 2024-01-08
Sex-limited experimental evolution drives transcriptomic divergence in a hermaphrodite. Cīrulis A, Nordén AK, Churcher AM, ..., Zadesenets KS, Abbott JK Genome Biol Evol 16 (1) - 2024-01-05 2023-12-29
Nuclear Hsp104 safeguards the dormant translation machinery during quiescence. Kohler V, Kohler A, Berglund LL, ..., Andréasson C, Büttner S Nat Commun 15 (1) 315 2024-01-05 2024-01-05
METTL3 drives telomere targeting of TERRA lncRNA through m6A-dependent R-loop formation: a therapeutic target for ALT-positive neuroblastoma. Vaid R, Thombare K, Mendez A, ..., Fischer M, Mondal T Nucleic Acids Res. - (-) - 2024-01-05 2024-01-05
Humoral immune responses to the monovalent XBB.1.5-adapted BNT162b2 mRNA booster in Sweden. Marking U, Bladh O, Aguilera K, ..., Sheward DJ, Thålin C Lancet Infect Dis - (-) - 2024-01-05 2024-01-05
METTL17 is an Fe-S cluster checkpoint for mitochondrial translation. Ast T, Itoh Y, Sadre S, ..., Amunts A, Mootha VK Mol. Cell - (-) - 2024-01-04 2024-01-04
Exonic trinucleotide repeat expansions in ZFHX3 cause spinocerebellar ataxia type 4: A poly-glycine disease. Wallenius J, Kafantari E, Jhaveri E, ..., Ehrencrona H, Puschmann A Am. J. Hum. Genet. 111 (1) 82-95 2024-01-04 2023-11-29
Elevated circulating adiponectin levels do not prevent anxiety-like behavior in a PCOS-like mouse model. Samad M, Ek J, Börchers S, ..., Asterholm IW, Benrick A Sci Rep 14 (1) 563 2024-01-04 2024-01-04
Mutation of the cyclooxygenase 2 gene promoter and anastomotic leakage in colorectal cancer patients: retrospective cohort study. Grahn O, Holmgren K, Hong MG, Sund M, Rutegård M BJS Open 8 (1) - 2024-01-03 2024-01-30
Identification of a Notch transcriptomic signature for breast cancer. Braune EB, Geist F, Tang X, ..., Wienke D, Lendahl U Breast Cancer Res. 26 (1) 4 2024-01-03 2024-01-03
Tissue-specific RNA Polymerase II promoter-proximal pause release and burst kinetics in a Drosophila embryonic patterning network. Hunt G, Vaid R, Pirogov S, ..., Reimegård J, Mannervik M Genome Biol. 25 (1) 2 2024-01-02 2024-01-02
Functional annotation of a divergent genome using sequence and structure-based similarity. Svedberg D, Winiger RR, Berg A, ..., Vossbrinck CR, Barandun J BMC Genomics 25 (1) 6 2024-01-02 2024-01-02
A comprehensive dataset on spatiotemporal variation of microbial plankton communities in the Baltic Sea. Latz MAC, Andersson A, Brugel S, ..., Torstensson A, Andersson AF Sci Data 11 (1) 18 2024-01-02 2024-01-02
Global Transcriptome Analysis Reveals Distinct Phases of the Endothelial Response to TNF. Struck EC, Belova T, Hsieh PH, ..., Dusart PJ, Butler LM J. Immunol. 212 (1) 117-129 2024-01-01 2023-11-29
A biobased binder of carboxymethyl cellulose, citric acid, chitosan and wheat gluten for nonwoven and paper. Wennman M, Pinon AC, Svagan AJ, Hellberg M, Hedenqvist MS Carbohydr Polym 323 (-) 121430 2024-01-01 2023-09-23
Whole-genome selective sweep analyses identifies the region and candidate gene associated with white earlobe color in Mediterranean chickens. Guo Y, Rubin CJ, Rönneburg T, ..., Hu X, Carlborg Ö Poult. Sci. 103 (1) 103232 2024-01-00 2023-10-24
The functional role of CST1 and CCL26 in asthma development. Hoyer A, Chakraborty S, Lilienthal I, ..., Katayama S, Söderhäll C Immun Inflamm Dis 12 (1) e1162 2024-01-00 2024-01-25
Substance P, NPY, CCK and their receptors in five brain regions in major depressive disorder with transcriptomic analysis of locus coeruleus neurons. Barde S, Aguila J, Zhong W, ..., Hedlund E, Hökfelt T Eur Neuropsychopharmacol 78 (-) 54-63 2024-01-00 2023-11-04
Population genomics of the muskox' resilience in the near absence of genetic variation. Pečnerová P, Lord E, Garcia-Erill G, ..., Moltke I, Siegismund HR Mol. Ecol. 33 (2) e17205 2024-01-00 2023-11-16
Phylogenomics and topological conflicts in the tribe Anthospermeae (Rubiaceae). Thureborn O, Wikström N, Razafimandimbison SG, Rydin C Ecol Evol 14 (1) e10868 2024-01-00 2024-01-25
New indicators for monitoring genetic diversity applied to alpine brown trout populations using whole genome sequence data. Kurland S, Saha A, Keehnen N, ..., Ryman N, Laikre L Mol. Ecol. 33 (2) e17213 2024-01-00 2023-11-28
New chemical and microbial perspectives on vitamin B1 and vitamer dynamics of a coastal system. Bittner MJ, Bannon CC, Rowland E, ..., Paerl RW, Riemann L ISME COMMUN. 4 (1) ycad016 2024-01-00 2024-01-10
Multiplexed experimental strategies for fragment library screening against challenging drug targets using SPR biosensors. FitzGerald EA, Vagrys D, Opassi G, ..., de Esch IJP, Danielson UH SLAS DISCOVERY: Advancing Life Sciences R&D 29 (1) 40-51 2024-01-00 2023-09-14
Molecular blueprints for spinal circuit modules controlling locomotor speed in zebrafish. Pallucchi I, Bertuzzi M, Madrid D, ..., Higashijima SI, El Manira A Nat. Neurosci. 27 (1) 78-89 2024-01-00 2023-11-02
Effects of Wholegrain Compared to Refined Grain Intake on Cardiometabolic Risk Markers, Gut Microbiota, and Gastrointestinal Symptoms in Children: A Randomized Crossover Trial. Madsen MTB, Landberg R, Nielsen DS, ..., Lauritzen L, Damsgaard CT Am. J. Clin. Nutr. 119 (1) 18-28 2024-01-00 2023-10-28
Distinct molecular targets of ProEGCG from EGCG and superior inhibition of angiogenesis signaling pathways for treatment of endometriosis. Hung SW, Gaetani M, Li Y, ..., Zubarev RA, Wang CC J Pharm Anal 14 (1) 100-114 2024-01-00 2023-09-11
DNA metabarcoding reveals spatial and temporal variation of fish eye fluke communities in lake ecosystems. Diaz-Suarez A, Noreikiene K, Kahar S, ..., Kisand V, Vasemägi A Int J Parasitol 54 (1) 33-46 2024-01-00 2023-08-24
Population genomic data reveal low genetic diversity, divergence and local adaptation among threatened Reeves's Pheasant (Syrmaticus reevesii) Lu Q, Wang P, Chang J, ..., Höglund J, Zhang Z Avian Research 15 (-) 100156 2024-00-00 2024-00-00
Publications 9.5.0